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Creators/Authors contains: "Sousa, Daniel"

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  1. Free, publicly-accessible full text available March 1, 2026
  2. The standardized spectral mixture model combines the specificity of a physically based representation of a spectrally mixed pixel with the generality and portability of a spectral index. Earlier studies have used spectrally and geographically diverse collections of broadband and spectroscopic imagery to show that the reflectance of the majority of ice-free landscapes on Earth can be represented as linear mixtures of rock and soil substrates (S), photosynthetic vegetation (V) and dark targets (D) composed of shadow and spectrally absorptive/transmissive materials. However, both broadband and spectroscopic studies of the topology of spectral mixing spaces raise questions about the completeness and generality of the Substrate, Vegetation, Dark (SVD) model for imaging spectrometer data. This study uses a spectrally diverse collection of 40 granules from the EMIT imaging spectrometer to verify the generality and stability of the spectroscopic SVD model and characterize the SVD topology and plane of substrates to assess linearity of spectral mixing. New endmembers for soil and non-photosynthetic vegetation (NPV; N) allow the planar SVD model to be extended to a tetrahedral SVDN model to better accommodate the 3D topology of the mixing space. The SVDN model achieves smaller misfit than the SVD, but does so at the expense of implausible fractions beyond [0, 1]. However, a refined spectroscopic SVD model still achieves small (<0.03) RMS misfit, negligible sensitivity to endmember variability and strongly linear scaling over more than an order of magnitude range of spatial resolution. 
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  3. Free, publicly-accessible full text available December 1, 2025
  4. Free, publicly-accessible full text available December 1, 2025
  5. Spaceborne spectroscopic imaging offers the potential to improve our understanding of biodiversity and ecosystem services, particularly for challenging and rich environments like mangroves. Understanding the signals present in large volumes of high-dimensional spectroscopic observations of vegetation communities requires the characterization of seasonal phenology and response to environmental conditions. This analysis leverages both spectroscopic and phenological information to characterize vegetation communities in the Sundarban riverine mangrove forest of the Ganges–Brahmaputra delta. Parallel analyses of surface reflectance spectra from NASA’s EMIT imaging spectrometer and MODIS vegetation abundance time series (2000–2022) reveal the spectroscopic and phenological diversity of the Sundarban mangrove communities. A comparison of spectral and temporal feature spaces rendered with low-order principal components and 3D embeddings from Uniform Manifold Approximation and Projection (UMAP) reveals similar structures with multiple spectral and temporal endmembers and multiple internal amplitude continua for both EMIT reflectance and MODIS Enhanced Vegetation Index (EVI) phenology. The spectral and temporal feature spaces of the Sundarban represent independent observations sharing a common structure that is driven by the physical processes controlling tree canopy spectral properties and their temporal evolution. Spectral and phenological endmembers reside at the peripheries of the mangrove forest with multiple outward gradients in amplitude of reflectance and phenology within the forest. Longitudinal gradients of both phenology and reflectance amplitude coincide with LiDAR-derived gradients in tree canopy height and sub-canopy ground elevation, suggesting the influence of surface hydrology and sediment deposition. RGB composite maps of both linear (PC) and nonlinear (UMAP) 3D feature spaces reveal a strong contrast between the phenological and spectroscopic diversity of the eastern Sundarban and the less diverse western Sundarban. 
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  6. Due to their transient nature, clouds represent anomalies relative to the underlying landscape of interest. Hence, the challenge of cloud identification can be considered a specific case in the more general problem of anomaly detection. The confounding effects of transient anomalies are particularly troublesome for spatiotemporal analysis of land surface processes. While spatiotemporal characterization provides a statistical basis to quantify the most significant temporal patterns and their spatial distributions without the need for a priori assumptions about the observed changes, the presence of transient anomalies can obscure the statistical properties of the spatiotemporal processes of interest. The objective of this study is to implement and evaluate a robust approach to distinguish clouds and other transient anomalies from diurnal and annual thermal cycles observed with time-lapse thermography. The approach uses Robust Principal Component Analysis (RPCA) to statistically distinguish low-rank (L) and sparse (S) components of the land surface temperature image time series, followed by a spatiotemporal characterization of its low rank component to quantify the dominant diurnal and annual thermal cycles in the study area. RPCA effectively segregates clouds, sensor anomalies, swath gaps, geospatial displacements and transient thermal anomalies into the sparse component time series. Spatiotemporal characterization of the low-rank component time series clearly resolves a variety of diurnal and annual thermal cycles for different land covers and water bodies while segregating transient anomalies potentially of interest. 
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  7. A geologic map is both a visual depiction of the lithologies and structures occurring at the Earth’s surface and a representation of a conceptual model for the geologic history in a region. The work needed to capture such multifaced information in an accurate geologic map is time consuming. Remote sensing can complement traditional primary field observations, geochemistry, chronometry, and subsurface geophysical data in providing useful information to assist with the geologic mapping process. Two novel sources of remote sensing data are particularly relevant for geologic mapping applications: decameter-resolution imaging spectroscopy (spectroscopic imaging) and meter-resolution multispectral shortwave infrared (SWIR) imaging. Decameter spectroscopic imagery can capture important mineral absorptions but is frequently unable to spatially resolve important geologic features. Meter-resolution multispectral SWIR images are better able to resolve fine spatial features but offer reduced spectral information. Such disparate but complementary datasets can be challenging to integrate into the geologic mapping process. Here, we conduct a comparative analysis of spatial and spectral scaling for two such datasets: one Airborne Visible/Infrared Imaging Spectrometer—Classic (AVIRIS-classic) flightline, and one WorldView-3 (WV3) scene, for a geologically complex landscape in Anza-Borrego Desert State Park, California. To do so, we use a two-stage framework that synthesizes recent advances in the spectral mixture residual and joint characterization. The mixture residual uses the wavelength-explicit misfit of a linear spectral mixture model to capture low variance spectral signals. Joint characterization utilizes nonlinear dimensionality reduction (manifold learning) to visualize spectral feature space topology and identify clusters of statistically similar spectra. For this study area, the spectral mixture residual clearly reveals greater spectral dimensionality in AVIRIS than WorldView (99% of variance in 39 versus 5 residual dimensions). Additionally, joint characterization shows more complex spectral feature space topology for AVIRIS than WorldView, revealing information useful to the geologic mapping process in the form of mineralogical variability both within and among mapped geologic units. These results illustrate the potential of recent and planned imaging spectroscopy missions to complement high-resolution multispectral imagery—along with field and lab observations—in planning, collecting, and interpreting the results from geologic field work. 
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  8. NASA’s Earth Surface Mineral Dust Source Investigation (EMIT) mission seeks to use spaceborne imaging spectroscopy (hyperspectral imaging) to map the mineralogy of arid dust source regions. Here we apply recent developments in Joint Characterization (JC) and the spectral Mixture Residual (MR) to explore the information content of data from this novel mission. Specifically, for a mosaic of 20 spectrally diverse scenes, we find: (1) a generalized three-endmember (Substrate, Vegetation, Dark; SVD) spectral mixture model is capable of capturing the preponderance (99% in three dimensions) of spectral variance with low misfit (99% pixels with <3.7% RMSE); (2) manifold learning (UMAP) is capable of identifying spatially coherent, physically interpretable clustering relationships in the spectral feature space; (3) UMAP yields results that are at least as informative when applied to the MR as when applied to raw reflectance; (4) SVD fraction information usefully contextualizes UMAP clustering relationships, and vice-versa (JC); and (5) when EMIT data are convolved to spectral response functions of multispectral instruments (Sentinel-2, Landsat 8/9, Planet SuperDove), SVD fractions correlate strongly across sensors, but UMAP clustering relationships for the EMIT hyperspectral feature space are far more informative than for simulated multispectral sensors. Implications are discussed for both the utility of EMIT data in the near-term and for the potential of high signal-to-noise (SNR) spaceborne imaging spectroscopy more generally, to transform the future of optical remote sensing in the years and decades to come. 
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